STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RSc0369Putative transmembrane cytochrome oxidase complex biogenesis factor transmembrane protein. (256 aa)    
Predicted Functional Partners:
ctaA
Putative heme o oxygenase (cytochrome aa3-controlling) transmembrane protein.
 
 0.996
RSc0370
Probable transmembrane protein.
 
 
 0.961
ctaB
Probable protoheme ix farnesyltransferase (heme o synthase) transmembrane protein; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group.
 
 
 0.961
ctaG
Probable cytochrome c oxidase assembly transmembrane protein.
 
 0.954
coxB
Cytochrome c oxidase subunit 2; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B).
 
 0.939
RSc0368
Probable transmembrane protein.
 
     0.911
petC
Putative cytochrome c1 precursor transmembrane protein.
  
 
 
 0.890
coxC
Probable cytochrome c oxidase subunit III transmembrane protein.
 
 
 0.828
RSc0373
Probable lipoprotein.
 
 
 0.815
RSc0387
Probable peptidase protein; EC_number 3.4.99.-; Belongs to the peptidase M16 family.
 
 
 
 0.801
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
Server load: low (40%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.