STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
nasEPutative nitrate transmembrane abc transporter protein. (287 aa)    
Predicted Functional Partners:
nasF
Putative nitrate transporter protein.
 0.999
nasD
Putative nitrate atp-binding abc transporter protein.
 0.998
nasA
Probable nitrate reductase large subunit oxidoreductase protein; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily.
 
  
 0.961
RSp1507
Probable atp-binding abc transporter protein.
 
 0.908
narG
Probable respiratory nitrate reductase alpha chain oxidoreductase protein; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
     
  0.900
narH
Probable respiratory nitrate reductase oxidoreductase protein.
     
  0.900
narI
Probable respiratory nitrate reductase transmembrane protein.
     
  0.900
RSc1199
Putative aaa atpase protein.
 
 0.883
ssuA2
Putative alkanesulfonates binding protein precursor.
 
 0.876
ssuA1
Putative alkanesulfonates binding precursor signal peptide protein.
 
 0.860
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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