Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
RSc1199 | nasE | RSc1199 | RSc0380 | Putative aaa atpase protein. | Putative nitrate transmembrane abc transporter protein. | 0.848 |
RSc1199 | nasF | RSc1199 | RSc0381 | Putative aaa atpase protein. | Putative nitrate transporter protein. | 0.903 |
RSc1199 | ssuA1 | RSc1199 | RSc1338 | Putative aaa atpase protein. | Putative alkanesulfonates binding precursor signal peptide protein. | 0.594 |
RSc1199 | ssuA2 | RSc1199 | RSp1383 | Putative aaa atpase protein. | Putative alkanesulfonates binding protein precursor. | 0.640 |
RSp1507 | nasE | RSp1507 | RSc0380 | Probable atp-binding abc transporter protein. | Putative nitrate transmembrane abc transporter protein. | 0.881 |
RSp1507 | nasF | RSp1507 | RSc0381 | Probable atp-binding abc transporter protein. | Putative nitrate transporter protein. | 0.951 |
RSp1507 | ssuA1 | RSp1507 | RSc1338 | Probable atp-binding abc transporter protein. | Putative alkanesulfonates binding precursor signal peptide protein. | 0.671 |
RSp1507 | ssuA2 | RSp1507 | RSp1383 | Probable atp-binding abc transporter protein. | Putative alkanesulfonates binding protein precursor. | 0.726 |
narG | narH | RSp0974 | RSp0975 | Probable respiratory nitrate reductase alpha chain oxidoreductase protein; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | Probable respiratory nitrate reductase oxidoreductase protein. | 0.999 |
narG | narI | RSp0974 | RSp0977 | Probable respiratory nitrate reductase alpha chain oxidoreductase protein; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | Probable respiratory nitrate reductase transmembrane protein. | 0.999 |
narG | nasA | RSp0974 | RSp1219 | Probable respiratory nitrate reductase alpha chain oxidoreductase protein; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | Probable nitrate reductase large subunit oxidoreductase protein; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily. | 0.937 |
narG | nasD | RSp0974 | RSc0379 | Probable respiratory nitrate reductase alpha chain oxidoreductase protein; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | Putative nitrate atp-binding abc transporter protein. | 0.900 |
narG | nasE | RSp0974 | RSc0380 | Probable respiratory nitrate reductase alpha chain oxidoreductase protein; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | Putative nitrate transmembrane abc transporter protein. | 0.900 |
narG | nasF | RSp0974 | RSc0381 | Probable respiratory nitrate reductase alpha chain oxidoreductase protein; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | Putative nitrate transporter protein. | 0.904 |
narH | narG | RSp0975 | RSp0974 | Probable respiratory nitrate reductase oxidoreductase protein. | Probable respiratory nitrate reductase alpha chain oxidoreductase protein; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | 0.999 |
narH | narI | RSp0975 | RSp0977 | Probable respiratory nitrate reductase oxidoreductase protein. | Probable respiratory nitrate reductase transmembrane protein. | 0.999 |
narH | nasA | RSp0975 | RSp1219 | Probable respiratory nitrate reductase oxidoreductase protein. | Probable nitrate reductase large subunit oxidoreductase protein; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily. | 0.955 |
narH | nasD | RSp0975 | RSc0379 | Probable respiratory nitrate reductase oxidoreductase protein. | Putative nitrate atp-binding abc transporter protein. | 0.900 |
narH | nasE | RSp0975 | RSc0380 | Probable respiratory nitrate reductase oxidoreductase protein. | Putative nitrate transmembrane abc transporter protein. | 0.900 |
narH | nasF | RSp0975 | RSc0381 | Probable respiratory nitrate reductase oxidoreductase protein. | Putative nitrate transporter protein. | 0.906 |
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