STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSc0433Probable transmembrane protein. (218 aa)    
Predicted Functional Partners:
RSc0432
Putative amp-dependent synthetase or ligase protein.
 
  
 0.952
RSc0431
Probable cog4261 : predicted acyltransferase protein.
 
     0.946
RSc0430
Putative signal peptide protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane).
 
   
 0.944
RSc0429
Putative mmpl exporter transmembrane protein.
 
     0.942
RSc0428
Putative polysaccharide deacetylase transmembrane protein.
 
     0.941
RSc0425
Putative cog4706, 3-hydroxylacyl-(acyl carrier protein) dehydratase.
 
  
 0.914
RSc0426
Conserved hypothetical protein; Miscellaneous; hypothetical/global homology.
 
     0.901
RSc0427
Probable 3-oxoacyl-[acyl-carrier-protein] synthase (beta-ketoacyl-acp synthase); Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
 
     0.884
RSc0436
Putative glycosyl transferase, family 2; protein.
 
     0.799
RSc0434
Putative acyl carrier protein-like.
 
     0.754
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.