STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSc0456Probable atp-binding transport abc transporter protein. (614 aa)    
Predicted Functional Partners:
RSc1961
Putative aaa atpase; protein.
     
 0.828
alc
Probable allantoicase (allantoate amidinohydrolase) protein; Belongs to the allantoicase family.
   
 
 0.807
RSc0457
Conserved hypothetical protein; Miscellaneous; hypothetical/global homology.
 
     0.749
RSc1366
Probable acyl-coa-binding protein.
     
 0.730
recA
Probable protein reca (recombinase a); Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage.; Belongs to the RecA family.
   
   0.611
RSc0454
Putative fe-s oxidoreductase fad/fmn-containing dehyfrogenase oxidoreductase protein.
   
   0.575
RSc0455
Putative nucleotide-binding protein.
       0.569
ubiE
Probable ubiquinone/menaquinone biosynthesis methyltransferase ubie protein; Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) and the conversion of 2-polyprenyl-6-methoxy-1,4-benzoquinol (DDMQH2) to 2-polyprenyl-3- methyl-6-methoxy-1,4-benzoquinol (DMQH2).
       0.548
RSc0835
Conserved hypothetical protein; Miscellaneous; hypothetical/global homology.
    
 0.510
RSc3235
Conserved hypothetical protein; Miscellaneous; hypothetical/global homology.
    
 0.510
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.