STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gdhAProbable glutamate dehydrogenase (nad(p)+) oxidoreductase protein; Belongs to the Glu/Leu/Phe/Val dehydrogenases family. (433 aa)    
Predicted Functional Partners:
gltB
Probable glutamate synthase (large subunit) oxidoreductase protein.
  
 0.987
putA
Delta-1-pyrroline-5-carboxylate dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family.
 
 
 0.968
lpdA
Probable dihydrolipoamide dehydrogenase (e3 component of pyruvate and 2-oxoglutarate dehydrogenases complexes) protein.
  
 
 0.962
glnA2
Probable glutamine synthetase protein.
  
 
 0.945
argA
Probable amino-acid acetyltransferase (n-acetylglutamate synthase)(ags) (nags) protein; Belongs to the acetyltransferase family. ArgA subfamily.
  
 
 0.941
gltD
Probable glutamate synthase (small subunit) oxidoreductase protein.
  
 
 0.936
RSc1823
Hypothetical protein; Small molecule metabolism.
   
 
 0.930
argJ
Arginine biosynthesis bifunctional protein ArgJ alpha chain; Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis: the synthesis of N-acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate. Belongs to the ArgJ family.
     
 0.928
RSp1220
Probable flavoprotein fad oxidoreductase.
   
 
 0.917
nirB
Probable nitrite reductase nadph (large subunit) oxidoreductase protein; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.
   
 
 0.917
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.