STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gltKProbable glutamate/aspartate transmembrane abc transporter protein. (227 aa)    
Predicted Functional Partners:
gltL
Putative glutamate/aspartate transport atp-binding abc transporter protein.
 0.998
RSc0481
Probable amino-acid-binding periplasmic (pbp) abc transporter protein.
 
 0.990
gltJ
Probable glutamate/aspartate transmembrane abc transporter protein.
 
 
 
0.964
RSc0084
Probable amino-acid-binding periplasmic (pbp) abc transporter protein.
 
 0.963
RSc2261
Putative amino-acid-binding periplasmic (pbp) abc transporter protein.
 
 0.963
RSc2260
Probable amino-acid atp-binding abc transporter protein.
 
 0.954
RSp0932
Probable amino-acid atp-binding abc transporter protein.
 
 0.954
RSc3408
Probable atp-binding abc transporter protein.
 
 0.953
RSp0479
Probable atp-binding abc transporter protein.
 
 0.951
RSc2106
Probable amino-acid atp-binding abc transporter protein.
 
 0.946
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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