STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gltLPutative glutamate/aspartate transport atp-binding abc transporter protein. (244 aa)    
Predicted Functional Partners:
gltK
Probable glutamate/aspartate transmembrane abc transporter protein.
 0.998
gltJ
Probable glutamate/aspartate transmembrane abc transporter protein.
 0.996
RSc3409
Probable amino-acid transmembrane abc transporter protein.
 
 0.980
RSc0481
Probable amino-acid-binding periplasmic (pbp) abc transporter protein.
 0.977
RSp0480
Probable amino acid transmembrane abc transporter protein.
 
 0.974
RSc1809
Probable composite atp-binding transmembrane abc transporter protein.
 
    
0.901
RSp1465
Probable abc-type transport system, permease component abc transporter protein.
 
      0.897
RSc2259
Probable amino acid transmembrane abc transporter protein.
 
 0.885
RSc2258
Probable amino acid transmembrane abc transporter protein.
 
 0.877
RSp0933
Probable amino acid transmembrane abc transporter protein.
 
 0.876
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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