STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RSc0507Probable amino acid dehydrogenase transmembrane protein. (423 aa)    
Predicted Functional Partners:
soxA2
Probable sarcosine oxidase (alpha subunit) oxidoreductase protein; Belongs to the GcvT family.
  
 
 0.814
soxA1
Probable sarcosine oxidase (alpha subunit) oxidoreductase protein; Belongs to the GcvT family.
  
 
 0.814
ubiH
Probable 2-octaprenyl-6-methoxyphenol hydroxylase oxidoreductase protein.
  
  
 0.745
pepP
Probable xaa-pro aminopeptidase (aminopeptidase p II) protein; Belongs to the peptidase M24B family.
  
  
 0.742
RSc0510
Probable signal transduction eal-ggdef domains transmembrane protein.
       0.465
RSc2113
Putative fad dependent oxidoreductase oxidoreductase protein.
  
   
 0.463
RSp0827
Probable dehydrogenase protein.
  
    0.452
RSc1732
Putative binding-protein-dependent transport systems inner membrane component abc transporter.
 
    0.444
RSc3407
Putative cog0665, glycine/d-amino acid oxidase (deaminating) oxidoreductase protein.
  
   
 0.442
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.