STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSc0525Probable signal peptide protein. (211 aa)    
Predicted Functional Partners:
glyQ
Probable glycyl-trna synthetase alpha chain protein.
       0.773
glyS
Probable glycyl-trna synthetase beta chain (glycine--trna ligasebeta chain) (glyrs) protein.
       0.588
RSc0521
Putative predicted metal-dependent hydrolase protein.
       0.548
RSc0522
Putative phosphate acyltransferase transmembrane protein.
       0.548
RSc0523
Putative histidinol phosphatase or related phosphatase protein.
       0.548
lnt
Probable apolipoprotein n-acyltransferase (alp n-acyltransferase). transmembrane; Catalyzes the phospholipid dependent N-acylation of the N- terminal cysteine of apolipoprotein, the last step in lipoprotein maturation; Belongs to the CN hydrolase family. Apolipoprotein N- acyltransferase subfamily.
       0.474
RSc0528
Putative mg2+ or co2+ transporter protein.
       0.447
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.