STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSc0549Probable transmembrane sensor histidine kinase transcription regulator protein. (513 aa)    
Predicted Functional Partners:
RSc1736
Probable two-component response regulator transcription regulator protein.
 0.981
RSc2935
Putative response regulator transcription regulator protein.
 0.981
RSc0550
Probable response regulator transcription regulator protein.
 
 0.960
RSc2936
Putative transmembrane sensor kinase transcription regulator protein.
  
  
 
0.921
RSc1735
Probable two-component transmembrane sensor kinase transcription regulator protein.
  
  
 
0.915
RSc2937
Putative periplasmic iron-binding signal peptide protein.
     0.912
RSc2934
Probable bacterial extracellular solute-binding, family 1; abc transporter protein.
     0.889
lpdA
Probable dihydrolipoamide dehydrogenase (e3 component of pyruvate and 2-oxoglutarate dehydrogenases complexes) protein.
    
 0.840
RSp1554
Probable two-component response regulator transcription regulator protein.
 
 0.823
RSc3392
Probable response regulator transcription regulator protein.
 
 0.818
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.