STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RSc0550Probable response regulator transcription regulator protein. (232 aa)    
Predicted Functional Partners:
RSc0549
Probable transmembrane sensor histidine kinase transcription regulator protein.
 
 
 0.960
RSp1676
Probable composite two-component regulatory (sensor kinase and response regulator hybrid) transcription regulator protein.
 
 
 0.865
RSp0524
Probable transmembrane sensor histidine kinase transcription regulator protein.
 
 
 0.836
RSp1553
Probable transmembrane two-component sensor kinase transcription regulator protein.
 
 0.833
RSc2936
Putative transmembrane sensor kinase transcription regulator protein.
 
 
 0.831
RSc1735
Probable two-component transmembrane sensor kinase transcription regulator protein.
 
 
 0.828
RSc3403
Probable two-component sensor kinase transcription regulator protein.
 
 
 0.825
rcsC
Probable capsular synthesis regulatory (two-component sensor kinase and response regulator hybrid) transcription regulator protein.
 
 
 0.823
czcS
Sensor protein; Member of a two-component regulatory system.
 
 
 0.822
RSp1043
Probable two-component sensor histidine kinase transcription regulator protein.
 
 
 0.820
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.