Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
RSc0069 | RSp1292 | RSc0069 | RSp1292 | Probable signal peptide protein. | Putative type-4 fimbrial pilin related signal peptide protein. | 0.665 |
RSc0069 | pilA | RSc0069 | RSc0558 | Probable signal peptide protein. | Type 4 fimbrial pilin signal peptide protein; Belongs to the N-Me-Phe pilin family. | 0.452 |
RSc0069 | pilC | RSc0069 | RSc2826 | Probable signal peptide protein. | Probable fimbrial assembly transmembrane protein. | 0.527 |
RSc0069 | pilM | RSc0069 | RSc2975 | Probable signal peptide protein. | Probable fimbrial type-4 assembly protein. | 0.898 |
RSc0069 | pilN | RSc0069 | RSc2974 | Probable signal peptide protein. | Probable fimbrial type-4 assembly membrane transmembrane protein. | 0.899 |
RSc0069 | pilO | RSc0069 | RSc2973 | Probable signal peptide protein. | Probable fimbrial type-4 assembly membrane transmembrane protein. | 0.899 |
RSc0069 | pilQ | RSc0069 | RSc2971 | Probable signal peptide protein. | Probable fimbrial type-4 assembly signal peptide protein. | 0.922 |
RSc0069 | plpA | RSc0069 | RSc0557 | Probable signal peptide protein. | Type 4 fimbrial pilin-like signal peptide protein; Belongs to the N-Me-Phe pilin family. | 0.504 |
RSc0559 | pilA | RSc0559 | RSc0558 | Putative lipida core-o-antigen ligase transmembrane protein. | Type 4 fimbrial pilin signal peptide protein; Belongs to the N-Me-Phe pilin family. | 0.641 |
RSc0559 | plpA | RSc0559 | RSc0557 | Putative lipida core-o-antigen ligase transmembrane protein. | Type 4 fimbrial pilin-like signal peptide protein; Belongs to the N-Me-Phe pilin family. | 0.493 |
RSp1292 | RSc0069 | RSp1292 | RSc0069 | Putative type-4 fimbrial pilin related signal peptide protein. | Probable signal peptide protein. | 0.665 |
RSp1292 | pilA | RSp1292 | RSc0558 | Putative type-4 fimbrial pilin related signal peptide protein. | Type 4 fimbrial pilin signal peptide protein; Belongs to the N-Me-Phe pilin family. | 0.474 |
RSp1292 | pilM | RSp1292 | RSc2975 | Putative type-4 fimbrial pilin related signal peptide protein. | Probable fimbrial type-4 assembly protein. | 0.822 |
RSp1292 | pilN | RSp1292 | RSc2974 | Putative type-4 fimbrial pilin related signal peptide protein. | Probable fimbrial type-4 assembly membrane transmembrane protein. | 0.790 |
RSp1292 | pilO | RSp1292 | RSc2973 | Putative type-4 fimbrial pilin related signal peptide protein. | Probable fimbrial type-4 assembly membrane transmembrane protein. | 0.734 |
RSp1292 | pilQ | RSp1292 | RSc2971 | Putative type-4 fimbrial pilin related signal peptide protein. | Probable fimbrial type-4 assembly signal peptide protein. | 0.666 |
RSp1292 | plpA | RSp1292 | RSc0557 | Putative type-4 fimbrial pilin related signal peptide protein. | Type 4 fimbrial pilin-like signal peptide protein; Belongs to the N-Me-Phe pilin family. | 0.531 |
pilA | RSc0069 | RSc0558 | RSc0069 | Type 4 fimbrial pilin signal peptide protein; Belongs to the N-Me-Phe pilin family. | Probable signal peptide protein. | 0.452 |
pilA | RSc0559 | RSc0558 | RSc0559 | Type 4 fimbrial pilin signal peptide protein; Belongs to the N-Me-Phe pilin family. | Putative lipida core-o-antigen ligase transmembrane protein. | 0.641 |
pilA | RSp1292 | RSc0558 | RSp1292 | Type 4 fimbrial pilin signal peptide protein; Belongs to the N-Me-Phe pilin family. | Putative type-4 fimbrial pilin related signal peptide protein. | 0.474 |
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