STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pilAType 4 fimbrial pilin signal peptide protein; Belongs to the N-Me-Phe pilin family. (168 aa)    
Predicted Functional Partners:
plpA
Type 4 fimbrial pilin-like signal peptide protein; Belongs to the N-Me-Phe pilin family.
 
  
 
0.942
pilE1
Probable type 4 fimbrial biogenesis signal peptide protein.
 
   
 0.769
pilQ
Probable fimbrial type-4 assembly signal peptide protein.
 
   
 0.755
RSc3437
Putative galactose mutarotase-like protein.
      
 0.738
pilN
Probable fimbrial type-4 assembly membrane transmembrane protein.
  
   
 0.661
pilM
Probable fimbrial type-4 assembly protein.
 
   
 0.652
RSc3252
Putative peptidase m, neutral zinc metallopeptidases, zinc-binding site; protein.
      
 0.645
pilO
Probable fimbrial type-4 assembly membrane transmembrane protein.
  
   
 0.644
mexC
Probable multidrug efflux system protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
      
 0.644
RSc0559
Putative lipida core-o-antigen ligase transmembrane protein.
 
   
 0.641
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.