STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Cooccurrence
Coexpression
Experiments
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[Homology]
Score
RSc0559Putative lipida core-o-antigen ligase transmembrane protein. (569 aa)    
Predicted Functional Partners:
RSc0686
Putative lipopolysaccharide o-side chain biosynthesis transmembrane protein.
 
  
 0.754
RSc1397
Probable transmembrane protein; Essential cell division protein that stabilizes the FtsZ protofilaments by cross-linking them and that serves as a cytoplasmic membrane anchor for the Z ring. Also required for the recruitment to the septal ring of downstream cell division proteins. Belongs to the ZipA family.
  
     0.735
RSc1523
Probable transmembrane protein.
  
     0.715
pilA
Type 4 fimbrial pilin signal peptide protein; Belongs to the N-Me-Phe pilin family.
 
   
 0.683
RSc1033
Probable na+/h+ antiporter nhad and related arsenite permeases transmembrane protein.
  
    0.643
RSc3094
Conserved hypothetical protein; Miscellaneous; hypothetical/global homology.
  
     0.606
epsB
Putative tyrosine-protein kinase epsb (eps ipolysaccharide export epsb). transmembrane; Probably involved in polymerization and/or export of exopolysaccharide EPS I which functions as a virulence factor. May be involved in an ATP-dependent process in the pathway for EPS I production, possibly export of the trimeric repeat units across the inner membrane or their polymerization (By similarity).
  
  
 0.582
RSc2404
Hypothetical signal peptide protein.
  
     0.557
RSc1181
Probable cog1807, 4-amino-4-deoxy-l-arabinose transferase and related glycosyltransferases of pmt family transmembrane protein.
 
     0.553
plpA
Type 4 fimbrial pilin-like signal peptide protein; Belongs to the N-Me-Phe pilin family.
 
   
 0.552
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.