STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSc0566Conserved hypothetical protein; Miscellaneous; hypothetical/global homology. (65 aa)    
Predicted Functional Partners:
RSc1001
Conserved hypothetical protein; Miscellaneous; hypothetical/global homology.
  
     0.769
RSc0564
Conserved hypothetical protein; Miscellaneous; hypothetical/global homology.
  
    0.750
ilvE
Probable branched-chain amino acid aminotransferase protein; Acts on leucine, isoleucine and valine. Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family.
  
    0.731
RSc1116
Hypothetical signal peptide protein.
  
     0.724
RSc0155
Hypothetical protein of unknown function duf185.
  
     0.721
RSc2555
Conserved hypothetical protein; Miscellaneous; hypothetical/global homology.
  
     0.716
RSc1325
Hypothetical protein of unknown function duf598.
  
     0.703
RSc2450
Putative stearoyl-coa desaturase oxidoreductase protein.
  
     0.699
nuoG
Probable nadh dehydrogenaseI(chain g) oxidoreductase protein; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. Belongs to the complex I 75 kDa subunit family.
  
     0.678
rfaF
Probable adp-heptose--lipopolysaccharide heptosyltransferase II protein.
       0.675
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.