STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSc0569Probable transmembrane protein. (107 aa)    
Predicted Functional Partners:
RSc0568
Putative branched-chain amino acid permease transmembrane protein.
 
  
 0.967
RSc0513
Probable branched-chain amino acid permease (azaleucine resistance) transmembrane protein.
 
  
 0.833
RSc0570
Putative predicted permeases transmembrane protein.
  
    0.774
pgk
Probable phosphoglycerate kinase protein; Belongs to the phosphoglycerate kinase family.
       0.679
phaP2
Probable polyhydroxybutyrate granule-associated protein (phasin) phap2.
  
     0.490
RSc0562
Conserved hypothetical protein; Miscellaneous; hypothetical/global homology.
 
     0.479
RSp1376
Putative predicted branched-chain amino acid permease (azaleucine resistance) transmembrane protein.
 
  
 0.464
RSc1598
Probable two-component transmembrane sensor histidine kinase transcription regulator protein.
 
     0.463
pykA1
Probable pyruvate kinase II protein; Belongs to the pyruvate kinase family.
       0.461
phaP1
Probable polyhydroxybutyrate granule-associated protein (phasin) phap1.
  
     0.461
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.