STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSc0588Probable signal transduction protein eal-ggdef domains. (903 aa)    
Predicted Functional Partners:
RSp0254
Probable signal transduction eal-ggdef domains transmembrane protein.
 
 
0.943
RSc3079
Probable composite two component regulatory (sensor histidine kinase and response regulator hybrid) transcription regulator protein.
 
 0.942
RSp1676
Probable composite two-component regulatory (sensor kinase and response regulator hybrid) transcription regulator protein.
  
 
 0.921
RSc0375
Probable signal transduction ggdef domain transmembrane protein.
 
 
0.868
RSp0012
Probable signal transduction ggdef domain transmembrane protein.
 
 
0.868
RSp1203
Probable signal transduction protein ggdef domain.
 
 
0.864
RSp0255
Probable methyl-accepting chemotaxis transducer transmembrane protein.
   
 
 0.860
aer
Probable aerotaxis sensor receptor (chemotaxis transducer) transmembrane protein.
   
 
 0.860
RSc3387
Probable two-component response regulator with eal domain transcription regulator protein.
 
 
0.837
RSp1208
Probable signal transduction protein eal-ggdef domains.
 
 
0.835
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.