STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSc0592Putative metal-dependent phosphohydrolase harboring a hd domain protein. (403 aa)    
Predicted Functional Partners:
RSc3143
Putative signal transduction ggdef domain transmembrane protein.
 
 0.918
RSp1203
Probable signal transduction protein ggdef domain.
 
 0.836
RSp0254
Probable signal transduction eal-ggdef domains transmembrane protein.
 
 
 0.776
RSp0398
Putative signal transduction ggdef domain transmembrane protein.
   
 0.750
RSp0012
Probable signal transduction ggdef domain transmembrane protein.
 
 
 0.740
RSp1524
Putative signal transduction ggdef domain transmembrane protein.
 
 0.737
RSc0588
Probable signal transduction protein eal-ggdef domains.
 
   
 0.726
RSc1893
Putative signal transduction ggdef domain transmembrane protein.
 
 0.717
RSp0400
Putative signal transduction ggdef domain transmembrane protein.
   
 0.688
RSp0519
Putative signal transduction ggdef domain transmembrane protein.
 
 
 0.649
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.