STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSc0592Putative metal-dependent phosphohydrolase harboring a hd domain protein. (403 aa)    
Predicted Functional Partners:
RSc3143
Putative signal transduction ggdef domain transmembrane protein.
 
 0.919
RSp1203
Probable signal transduction protein ggdef domain.
 
 0.841
RSp0254
Probable signal transduction eal-ggdef domains transmembrane protein.
 
 
 0.782
RSp0398
Putative signal transduction ggdef domain transmembrane protein.
   
 0.751
RSp0012
Probable signal transduction ggdef domain transmembrane protein.
 
 0.748
RSp1524
Putative signal transduction ggdef domain transmembrane protein.
 
 0.741
RSc1893
Putative signal transduction ggdef domain transmembrane protein.
 
 0.722
RSc0588
Probable signal transduction protein eal-ggdef domains.
   
 0.716
RSp1155
Probable signal transduction protein eal-ggdef domains.
 
   
 0.711
RSc0510
Probable signal transduction eal-ggdef domains transmembrane protein.
 
 0.710
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.