STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSc0624Probable zinc-dependent alcohol dehydrogenase oxidoreductase protein. (338 aa)    
Predicted Functional Partners:
fruB
Probable multiphosphoryl transfer protein mtp.
     
 0.534
RSp0430
Probable alcohol dehydrogenase (adh-ht) oxidoreductase protein.
 
 
 0.515
RSp0641
Probable non ribosomal peptide synthetase protein.
     
 0.466
RSc0625
Probable transcription regulator protein.
       0.451
RSp1282
Probable pts system, fructose-specific eIIa/hpr/ei components protein.
  
  
 0.445
RSc0181
Probable pseudogene (alcohol dehydrogenase n-terminal fragment) protein.
 
   
 0.441
RSc1806
Probable polyketide synthase protein.
  
  
 0.426
RSc0636
Probable truncated oxidoreductase (n-terminal part) protein.
 
   
 0.401
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.