STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSc0626Probable aldehyde dehydrogenase (subunit III) oxidoreductase protein. (152 aa)    
Predicted Functional Partners:
RSc0627
Putative dehydrogenase large chain transmembrane protein.
 
 0.988
RSc1468
Putative oxidoreductase molybdopterin-binding subunit, oxidoreductase protein.
 
 0.972
iorB2
Probable transmembrane isoquinoline 1-oxidoreductase (beta subunit) oxidoreductase protein.
 
 0.947
xdhB
Probable xanthine dehydrogenase (subunit b) oxidoreductase protein.
 
     0.941
RSp0325
Probable dehydrogenase, large chain oxidoreductase protein.
 
 0.940
RSc0628
Probable xanthine and co dehydrogenases maturation factor protein.
 
  
 0.907
RSc1467
Probable dehydrogenase, oxidoreductase protein.
 
 0.873
RSc1463
Hypothetical protein of unknown function duf182.
 
  
 0.802
RSc2920
Putative hydroxamate-type ferrisiderophore receptor signal peptide protein.
   
    0.716
RSc2041
Urea transport system substrate-binding protein; Probable abc-type branched-chain amino acid transport systems, periplasmic component harboring a twin-arginine translocation pathway signal; abc transporter protein.
   
    0.705
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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