STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSc0627Putative dehydrogenase large chain transmembrane protein. (736 aa)    
Predicted Functional Partners:
RSc0626
Probable aldehyde dehydrogenase (subunit III) oxidoreductase protein.
 
 0.990
RSp0324
Probable dehydrogenase, small chain oxidoreductase protein.
 
 0.965
iorA2
Probable isoquinoline 1-oxidoreductase (alpha subunit) oxidoreductase protein.
 
 0.958
RSc0772
Putative oxidoreductase dehydrogenase (cytochrome c subunit) signal peptide protein.
 
  
 0.912
RSc0628
Probable xanthine and co dehydrogenases maturation factor protein.
 
  
 0.878
RSc1469
Probable oxidoreductase oxidoreductase protein.
 
 0.812
RSc1467
Probable dehydrogenase, oxidoreductase protein.
  
 
 0.766
RSc1463
Hypothetical protein of unknown function duf182.
 
  
 0.715
RSp0327
Conserved hypothetical protein; Miscellaneous; hypothetical/global homology.
 
   
 0.589
RSc0629
Putative oxidoreductase cytochrome c552 precursor signal peptide protein.
 
     0.566
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.