STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSc0628Probable xanthine and co dehydrogenases maturation factor protein. (312 aa)    
Predicted Functional Partners:
RSc0626
Probable aldehyde dehydrogenase (subunit III) oxidoreductase protein.
 
  
 0.907
RSp0327
Conserved hypothetical protein; Miscellaneous; hypothetical/global homology.
 
  
 0.879
RSc0627
Putative dehydrogenase large chain transmembrane protein.
 
  
 0.878
iorA2
Probable isoquinoline 1-oxidoreductase (alpha subunit) oxidoreductase protein.
 
  
 0.803
RSp0324
Probable dehydrogenase, small chain oxidoreductase protein.
 
  
 0.803
RSc1469
Probable oxidoreductase oxidoreductase protein.
 
  
 0.790
iorB2
Probable transmembrane isoquinoline 1-oxidoreductase (beta subunit) oxidoreductase protein.
 
  
 0.768
RSp0325
Probable dehydrogenase, large chain oxidoreductase protein.
 
  
 0.710
RSc1467
Probable dehydrogenase, oxidoreductase protein.
 
  
 0.702
RSc0629
Putative oxidoreductase cytochrome c552 precursor signal peptide protein.
       0.678
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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