STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
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[Homology]
Score
RSc0629Putative oxidoreductase cytochrome c552 precursor signal peptide protein. (104 aa)    
Predicted Functional Partners:
RSc3260
Probable cytochrome c551/c552 transmembrane protein.
  
  
 
0.913
nosR
Probable transmembrane regulatory nosr transcription regulator protein.
  
  
 0.706
RSc0628
Probable xanthine and co dehydrogenases maturation factor protein.
       0.678
RSc1252
Putative nitrous oxide reductase, n-terminal; signal peptide protein.
  
  
 0.603
RSc2224
Putative bacterial ring hydroxylating dioxygenase, alpha subunit; EC_number 1.14.1.-.
  
     0.586
RSc3255
Putative cytochrome c transmembrane protein.
 
  
 0.573
RSc0627
Putative dehydrogenase large chain transmembrane protein.
 
     0.566
nosZ
Probable nitrous-oxide reductase precursor (n(2)or) (n2oreductase). oxidoreductase protein; Nitrous-oxide reductase is part of a bacterial respiratory system which is activated under anaerobic conditions in the presence of nitrate or nitrous oxide; Belongs to the NosZ family.
  
  
 0.551
norB
Probable nitric oxide reductase (subunit b) transmembrane protein.
  
  
 0.498
sorAb
Probable sulfite:cytochrome c oxidoreductase (subunit a) oxidoreductase protein.
   
 
 0.495
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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