STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSc0629Putative oxidoreductase cytochrome c552 precursor signal peptide protein. (104 aa)    
Predicted Functional Partners:
RSc3260
Probable cytochrome c551/c552 transmembrane protein.
  
  
 
0.913
RSc0628
Probable xanthine and co dehydrogenases maturation factor protein.
       0.678
nosR
Probable transmembrane regulatory nosr transcription regulator protein.
  
  
 0.664
RSc2224
Putative bacterial ring hydroxylating dioxygenase, alpha subunit; EC_number 1.14.1.-.
  
     0.586
RSc1252
Putative nitrous oxide reductase, n-terminal; signal peptide protein.
  
  
 0.577
RSc0627
Putative dehydrogenase large chain transmembrane protein.
 
     0.566
sorAb
Probable sulfite:cytochrome c oxidoreductase (subunit a) oxidoreductase protein.
   
 
 0.562
sorAa
Probable sulfite:cytochrome c oxidoreductase (subunit a) oxidoreductase protein.
   
 
 0.551
rsl
Fucose-binding lectin protein.
      
 0.537
RSc3255
Putative cytochrome c transmembrane protein.
 
  
 0.536
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.