STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSc0633Putative flavodoxin/nitric oxide synthase; protein. (190 aa)    
Predicted Functional Partners:
RSc0632
Putative zn-dependent alcohol dehydrogenases oxidoreductase protein.
  
   0.806
RSc0631
Probable transmembrane protein.
       0.615
dps
Putative dna protection during starvation or oxydative stress transcription regulator protein; Belongs to the Dps family.
  
  
 0.536
katE
Probable catalase hydroperoxidase hpII oxidoreductase protein; Belongs to the catalase family.
  
  
 0.473
RSc2148
Hypothetical peptidoglycan-binding lysm protein.
   
  
 0.453
RSc0069
Probable signal peptide protein.
   
  
 0.438
RSc1707
Putative transmembrane protein.
   
  
 0.421
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.