STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSc0636Probable truncated oxidoreductase (n-terminal part) protein. (122 aa)    
Predicted Functional Partners:
RSc0638
Probable truncated oxidoreductase (c-terminal part) protein.
     0.987
qor
Probable nadph:quinone reductase, zeta-crystallin homolog oxidoreductase protein.
  
     0.692
tISRso5-3
Isrso5-transposase protein.
  
    0.661
RSc2065
Putative nadph quinone oxidoreductase oxidoreductase protein.
 
     0.656
RSc1806
Probable polyketide synthase protein.
  
 
 0.641
RSp0641
Probable non ribosomal peptide synthetase protein.
  
 
 0.637
RSc0635
Probable transcription regulator protein.
       0.560
RSc1203
Probable oxidoreductase protein.
  
     0.550
RSp1422
Putative peptide synthetase protein.
  
  
 0.517
RSc1810
Probable polyketide synthase protein.
  
 
 0.506
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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