STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSc0643Probable transmembrane protein. (358 aa)    
Predicted Functional Partners:
RSc0644
Putative transmembrane protein.
 
     0.938
RSc0645
Conserved hypothetical protein; Miscellaneous; hypothetical/global homology.
       0.503
RSc0646
Conserved hypothetical protein; Miscellaneous; hypothetical/global homology.
       0.503
RSc0647
Probable transmembrane protein.
       0.503
mopA
Probable 60 kda chaperonin (protein cpn60) (groel protein); Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions.
       0.439
RSp0416
Probable ferric siderophore receptor outer membrane signal peptide protein.
  
     0.422
RSp0611
Probable transmembrane protein.
  
     0.405
RSp1270
Putative signal peptide protein.
  
     0.403
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.