STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pilGProbable twitching motility two-component response regulator transcription regulator protein. (179 aa)    
Predicted Functional Partners:
pilI
Putative twitching motility protein.
 
 0.996
pilJ
Putative twitching motility transmembrane protein.
 
 0.993
RSc0672
Chemosensory pili system protein ChpA (sensor histidine kinase/response regulator); Putative composite two component regulatory (sensor histidine kinase and response regulator hybrid) transcription regulator protein.
 
0.986
cheA
Probable chemotaxis sensor histidine kinase transcription regulator protein.
 
 
 0.896
RSc3079
Probable composite two component regulatory (sensor histidine kinase and response regulator hybrid) transcription regulator protein.
 
 
 0.849
rcsC
Probable capsular synthesis regulatory (two-component sensor kinase and response regulator hybrid) transcription regulator protein.
 
 
 0.787
pilH
Putative twitching motility two-component response regulator transcription regulator protein.
 
 
 
0.777
pehS
Probable transmembrane sensor histidine kinase transcription regulator protein.
  
 
   0.760
RSp1676
Probable composite two-component regulatory (sensor kinase and response regulator hybrid) transcription regulator protein.
 
 
0.752
vsrB
Composite two-component regulatory (sensor kinase and response regulator hybrid) transcription regulator protein.
 
 
 0.749
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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