STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pilJPutative twitching motility transmembrane protein. (743 aa)    
Predicted Functional Partners:
RSc0672
Chemosensory pili system protein ChpA (sensor histidine kinase/response regulator); Putative composite two component regulatory (sensor histidine kinase and response regulator hybrid) transcription regulator protein.
 
 0.997
pilI
Putative twitching motility protein.
 
 0.991
pilG
Probable twitching motility two-component response regulator transcription regulator protein.
 
 0.990
pilH
Putative twitching motility two-component response regulator transcription regulator protein.
 
 0.985
cheA
Probable chemotaxis sensor histidine kinase transcription regulator protein.
 
 
 0.867
pilP
Probable fimbrial type-4 assembly lipoprotein.
  
   
 0.863
RSp0598
Putative response regulator transcription regulator protein.
 
 
 0.853
pilQ
Probable fimbrial type-4 assembly signal peptide protein.
  
  
 0.795
cheW
Probable chemotaxis protein chew.
 
 
 0.759
RSc0673
Hypothetical protein; Miscellaneous; unknown.
     
 0.738
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.