STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSc0673Hypothetical protein; Miscellaneous; unknown. (96 aa)    
Predicted Functional Partners:
RSc0672
Chemosensory pili system protein ChpA (sensor histidine kinase/response regulator); Putative composite two component regulatory (sensor histidine kinase and response regulator hybrid) transcription regulator protein.
     
 0.893
pilJ
Putative twitching motility transmembrane protein.
     
 0.738
pilI
Putative twitching motility protein.
     
 0.733
RSc0667
Probable rubredoxin protein.
     
 0.606
pilG
Probable twitching motility two-component response regulator transcription regulator protein.
     
 0.602
pilH
Putative twitching motility two-component response regulator transcription regulator protein.
     
 0.571
rsuA
Probable ribosomal small subunit pseudouridine synthase a protein; Belongs to the pseudouridine synthase RsuA family.
       0.526
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.