STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene Fusion
Co-occurrence
Co-expression
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[Homology]
Score
apaHBis(5'-nucleosyl)-tetraphosphatase, symmetrical; Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP; Belongs to the Ap4A hydrolase family. (283 aa)    
Predicted Functional Partners:
RSc3104
Probable calcium-binding signal peptide protein.
    
 0.934
RSc0201
Putative beta-lactamase-like;rna-metabolising metallo-beta-lactamase; protein.
   
 0.905
RSp0087
Conserved hypothetical protein; Miscellaneous; hypothetical/global homology.
    
 0.859
RSc0835
Conserved hypothetical protein; Miscellaneous; hypothetical/global homology.
   
 0.819
RSc3235
Conserved hypothetical protein; Miscellaneous; hypothetical/global homology.
   
 0.819
RSp0216
Putative type III effector protein (serine/threonine-protein kinase).
    
 0.804
apaG
Conserved hypothetical protein; Miscellaneous; hypothetical/global homology.
  
  
 0.775
fkpA
Probable fkbp-type peptidyl-prolyl cis-trans isomerase (ppiase)(immunophilin) protein.
    
 0.773
RSc1565
Putative fkbp-type peptidyl-prolyl cis-trans isomerase signal peptide protein.
    
 0.773
recA
Probable protein reca (recombinase a); Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage.; Belongs to the RecA family.
   
 
 0.737
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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