STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSc0716Putative type 4 fimbrial pilin related transmembrane protein. (186 aa)    
Predicted Functional Partners:
RSc0718
Putative type 4 fimbrial biogenesis pily1-related protein transmembrane.
  
  
 0.832
RSc0720
Probable type 4 fimbrial biogenesis pilw-related protein transmembrane.
  
  
 0.827
RSc0719
Probable type 4 fimbrial biogenesis pilx-related signal peptide protein.
  
  
 0.826
RSc0717
Putative type-4 frimbrial pilin-related signal peptide protein.
  
  
 0.821
RSc0721
Probable transmembrane protein.
       0.773
ribD
Diaminohydroxyphosphoribosylaminopyrimidine deaminase; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family.
       0.744
ribE
Probable riboflavin synthase (alpha chain) protein.
       0.697
RSc0724
Putative type-4 fimbrial biogenesis pily1-related signal peptide protein.
  
  
 0.625
RSc0723
Probable type-4 fimbrial pilin-related transmembrane protein.
  
  
 0.610
ribAB
3,4-dihydroxy-2-butanone 4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; Belongs to the DHBP synthase family.
       0.592
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.