STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
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Textmining
[Homology]
Score
RSc0747Conserved hypothetical protein; Miscellaneous; hypothetical/global homology; Belongs to the Nudix hydrolase family. (153 aa)    
Predicted Functional Partners:
RSc0749
Probable atp-binding abc transporter protein.
 
     0.808
RSc0748
Probable abc-type uncharacterized transport system, permease component abc transporter protein.
       0.773
nnrD
Putative sugar kinase protein; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow the repair of [...]
  
 0.695
RSc2108
Probable porin signal peptide protein.
  
     0.582
RSp0051
Probable porin signal peptide protein.
  
     0.560
RSc1082
Probable outer membrane porin protein.
  
     0.531
RSp0512
Probable papd-like; transmembrane protein.
  
     0.451
RSp1594
Probable porin signal peptide protein.
  
     0.443
RSc2760
Probable ipr001702 outer membrane (porin) signal peptide protein.
  
     0.428
RSc0013
Putative esterase of the alpha-beta hydrolase superfamily protein.
  
     0.407
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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