STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
RSc0769Putative hydrolase glycosidase protein. (734 aa)    
Predicted Functional Partners:
nagZ
Putative hexosaminidase protein; Plays a role in peptidoglycan recycling by cleaving the terminal beta-1,4-linked N-acetylglucosamine (GlcNAc) from peptide- linked peptidoglycan fragments, giving rise to free GlcNAc, anhydro-N- acetylmuramic acid and anhydro-N-acetylmuramic acid-linked peptides. Belongs to the glycosyl hydrolase 3 family. NagZ subfamily.
  
  
 
0.925
RSp0275
Putative glycosyl hydrolase family 18 with carbohydrate binding domain transmembrane protein.
     
 0.911
anmK
Hypothetical protein of unknown function upf0075; Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling; Belongs to the anhydro-N-acetylmuramic acid kinase family.
 
   
 0.611
tolA
Probable tola-related transport transmembrane protein.
  
  
 0.518
RSp1545
Putative hemagglutinin-related protein.
  
  
 0.518
gltB
Probable glutamate synthase (large subunit) oxidoreductase protein.
 
   
 0.499
scrA
Probable pts system, sucrose-specific (IIbc component) transmembrane protein.
  
  
 0.492
RSc0768
Hypothetical protein; Miscellaneous; unknown.
       0.456
RSc1452
Probable transmembrane protein.
 
   
 0.435
RSp0641
Probable non ribosomal peptide synthetase protein.
 
  
 0.427
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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