STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSc0770Putative transmembrane dehydrogenase (small subunit) oxidoreductase protein. (163 aa)    
Predicted Functional Partners:
RSc0772
Putative oxidoreductase dehydrogenase (cytochrome c subunit) signal peptide protein.
   
   0.925
RSc0771
Putative transmembrane dehydrogenase (large subunit) oxidoreductase protein.
   
   0.924
RSp0989
Putative cytochrome c, monohaem transmembrane protein.
   
   0.644
RSp0904
Putative choline dehydrogenase and related flavoproteins oxidoreductase.
   
   0.599
RSp1167
Conserved hypothetical protein; Miscellaneous; hypothetical/global homology.
   
   0.599
RSc0123
Putative choline dehydrogenase and related flavoproteins oxidoreductase.
   
   0.555
betA
Putative choline dehydrogenase lipoprotein oxidoreductase.
   
   0.555
coxB
Cytochrome c oxidase subunit 2; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B).
   
   0.521
RSc1279
Probable cytochrome c oxidase (subunit III) transmembrane protein; C-type cytochrome. Part of the cbb3-type cytochrome c oxidase complex.
   
   0.521
RSc3154
Probable signal peptide protein.
   
   0.521
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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