STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fadD2Probable long-chain-fatty-acid--coa ligase protein. (568 aa)    
Predicted Functional Partners:
RSp0641
Probable non ribosomal peptide synthetase protein.
  
 0.957
RSp1434
Putative acyl-coa synthetases(amp-forming) protein.
 
    
0.927
RSc1564
Putative phospholipid/glycerol acyltransferase transmembrane protein.
  
 0.913
RSc1810
Probable polyketide synthase protein.
  
 0.908
RSc1806
Probable polyketide synthase protein.
  
 0.756
RSp1422
Putative peptide synthetase protein.
 
  
0.743
RSc2020
Probable acyl-coa dehydrogenase oxidoreductase protein.
  
 
  0.598
RSc1762
Probable acyl-coa dehydrogenase oxidoreductase protein.
  
 
  0.576
RSp0652
Probable acyl-coa dehydrogenase oxidoreductase protein.
 
 
 
  0.529
RSc0121
Probable acyl-coa dehydrogenase oxidoreductase protein.
   
 
  0.520
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.