STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RSc0781Probable ankyrin repeat harboring signal peptide protein. (261 aa)    
Predicted Functional Partners:
RSc1788
Probable ankyrin repeat harboring signal peptide protein.
  
     0.774
RSc0782
Probable cation transport protein; Catalyzes the cleavage of glutathione into 5-oxo-L-proline and a Cys-Gly dipeptide. Acts specifically on glutathione, but not on other gamma-glutamyl peptides; Belongs to the gamma-glutamylcyclotransferase family.
   
 
 0.771
RSc0257
Putative type III effector protein with ankyrin repeats.
  
     0.764
RSc1806
Probable polyketide synthase protein.
    
 0.652
RSp0087
Conserved hypothetical protein; Miscellaneous; hypothetical/global homology.
   
 0.620
RSc3104
Probable calcium-binding signal peptide protein.
    
 0.618
apaH
Bis(5'-nucleosyl)-tetraphosphatase, symmetrical; Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP; Belongs to the Ap4A hydrolase family.
   
 0.611
RSp0216
Putative type III effector protein (serine/threonine-protein kinase).
    
 0.606
RSc1961
Putative aaa atpase; protein.
    
 0.601
RSc3358
Putative set domain protein; Miscellaneous; hypothetical/global homology.
    
 0.599
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.