STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSc0785Conserved hypothetical protein; Miscellaneous; hypothetical/global homology. (182 aa)    
Predicted Functional Partners:
minE
Probable cell division topological specificity factor protein; Prevents the cell division inhibition by proteins MinC and MinD at internal division sites while permitting inhibition at polar sites. This ensures cell division at the proper site by restricting the formation of a division septum at the midpoint of the long axis of the cell.
   
    0.847
phoU
Probable phosphate transport system protein; Plays a role in the regulation of phosphate uptake.
   
    0.700
lolB
Probable outer-membrane lipoprotein lolb precursor; Plays a critical role in the incorporation of lipoproteins in the outer membrane after they are released by the LolA protein.
   
    0.684
traF
Probable conjugal transfer traf transmembrane protein.
   
    0.682
fkpA
Probable fkbp-type peptidyl-prolyl cis-trans isomerase (ppiase)(immunophilin) protein.
       0.669
lepB
Probable signal peptidaseI(spaseI transmembrane protein; Belongs to the peptidase S26 family.
   
    0.541
RSc1716
Putative signal peptidaseI(spaseI protein; Belongs to the peptidase S26 family.
   
    0.541
RSc0786
Conserved hypothetical protein; Miscellaneous; hypothetical/global homology.
       0.485
RSc0787
Probable transmembrane protein.
       0.485
RSc0789
Conserved hypothetical protein; Miscellaneous; hypothetical/global homology.
 
    0.485
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.