STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSc0786Conserved hypothetical protein; Miscellaneous; hypothetical/global homology. (938 aa)    
Predicted Functional Partners:
RSc0787
Probable transmembrane protein.
 
  
 0.968
RSp0512
Probable papd-like; transmembrane protein.
  
     0.616
RSc0225
Putative cog3541, nucleotidyltransferase protein.
  
     0.498
RSp1137
Putative rhs-related transmembrane protein.
  
     0.496
RSc0785
Conserved hypothetical protein; Miscellaneous; hypothetical/global homology.
       0.485
RSc1564
Putative phospholipid/glycerol acyltransferase transmembrane protein.
 
   
 0.484
fkpA
Probable fkbp-type peptidyl-prolyl cis-trans isomerase (ppiase)(immunophilin) protein.
       0.420
RSp0741
Putative transmembrane protein.
  
    0.419
RSp1029
Putative transmembrane acyl-coa desaturase (fatty acid desaturase) oxidoreductase protein.
  
     0.414
RSp0766
Probable transmembrane protein.
  
     0.411
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.