STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSc0790Probable signal peptide protein; Belongs to the UPF0312 family. (189 aa)    
Predicted Functional Partners:
RSc2718
Probable signal peptide protein; Belongs to the UPF0312 family.
 
     0.786
RSc0789
Conserved hypothetical protein; Miscellaneous; hypothetical/global homology.
       0.773
RSc2719
Putative cytochrome b-561 transmembrane protein.
 
  
 0.671
RSc0788
Probable transmembrane protein.
       0.634
glnS
Probable glutaminyl-trna synthetase (glutamine--trna ligase)(glnrs) protein.
       0.634
RSc0792
Putative lipase chaperone protein.
       0.482
gpmA
2,3-bisphosphoglycerate-dependent phosphoglycerate mutase; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate; Belongs to the phosphoglycerate mutase family. BPG- dependent PGAM subfamily.
  
    0.420
RSc3260
Probable cytochrome c551/c552 transmembrane protein.
  
     0.402
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.