STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSc0799Putative purine nucleoside permease protein. (346 aa)    
Predicted Functional Partners:
RSc0798
Putative purine nucleoside permease protein.
 
    
0.781
RSp0729
Hypothetical protein of unknown function duf985.
      0.738
RSp1167
Conserved hypothetical protein; Miscellaneous; hypothetical/global homology.
  
     0.558
RSp0197
Putative chorismate mutase protein; Catalyzes the Claisen rearrangement of chorismate to prephenate.
  
     0.451
RSc0800
Putative ferrisiderophore receptor signal peptide protein.
       0.430
RSc0801
Putative lipoprotein transmembrane.
       0.430
RSp1469
Probable tyrosine phosphatase protein.
  
     0.428
alaS
Probable alanyl-trna synthetase (alanine--trna ligase) (alars) protein; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain.
       0.422
xdhA
Putative xanthine dehydrogenase (subunit a) oxidoreductase protein.
 
     0.412
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.