STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSc0805Hypothetical major facilitator transporter protein. (409 aa)    
Predicted Functional Partners:
RSc0806
Putative aldolase protein.
   
   0.572
RSc0807
Putative tautomerase (4-oxalocrotonate tautomerase) protein.
       0.552
RSc0804
Probable transcription regulator protein; Belongs to the LysR transcriptional regulatory family.
       0.545
asmA
Putative involved in outer membrane biogenesis transmembrane protein.
  
     0.527
RSp0641
Probable non ribosomal peptide synthetase protein.
     
 0.487
RSc0802
Putative membrane protease subunit, stomatin/prohibitin homolog transmembrane protein.
   
   0.447
RSc2377
Proline rich protein.
  
     0.434
ltaA
Probable low specificity l-threonine aldolase protein; Catalyzes the cleavage of L-allo-threonine and L-threonine to glycine and acetaldehyde.
       0.433
RSc0803
Putative membrane-bound serine protease (clpp class) transmembrane protein.
       0.412
RSc0809
Putative hydrolase protein.
       0.404
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.