STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSc0806Putative aldolase protein. (261 aa)    
Predicted Functional Partners:
RSc0807
Putative tautomerase (4-oxalocrotonate tautomerase) protein.
     
 0.766
RSc1999
Putative citrate lyase beta subunit protein; Belongs to the HpcH/HpaI aldolase family.
   
    0.673
ltaA
Probable low specificity l-threonine aldolase protein; Catalyzes the cleavage of L-allo-threonine and L-threonine to glycine and acetaldehyde.
       0.588
RSc0809
Putative hydrolase protein.
   
   0.577
RSc0805
Hypothetical major facilitator transporter protein.
  
    0.555
dalK
Putative d-arabinitol kinase protein.
  
  
 0.498
sirA
Probable redox protein, regulator of disulfide bond formation; Belongs to the sulfur carrier protein TusA family.
       0.464
fruA
Probable pts system, fructose-specific IIbc component (eIIbc-fru) (fructose-permease IIbc component) transmembrane protein.
   
  
 0.446
RSc0835
Conserved hypothetical protein; Miscellaneous; hypothetical/global homology.
    
  0.409
RSc3235
Conserved hypothetical protein; Miscellaneous; hypothetical/global homology.
    
  0.409
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.