STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sirAProbable redox protein, regulator of disulfide bond formation; Belongs to the sulfur carrier protein TusA family. (75 aa)    
Predicted Functional Partners:
iscS
Probable cysteine sulfinate desulfinase / cysteine desulfurase protein; Master enzyme that delivers sulfur to a number of partners involved in Fe-S cluster assembly, tRNA modification or cofactor biosynthesis. Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine. Functions as a sulfur delivery protein for Fe-S cluster synthesis onto IscU, an Fe-S scaffold assembly protein, as well as other S acceptor proteins.
   
 0.978
RSp0173
Putative cysteine desulfurase (trna sulfurtransferase) protein.
   
 0.978
sbnA
Probable cysteine synthase protein; Catalyzes the synthesis of N-((2S)-2-amino-2-carboxyethyl)-L- glutamate (ACEGA) from O-phospho-L-serine and L-glutamate.
  
  
 0.812
RSc0809
Putative hydrolase protein.
       0.694
ltaA
Probable low specificity l-threonine aldolase protein; Catalyzes the cleavage of L-allo-threonine and L-threonine to glycine and acetaldehyde.
       0.615
RSc0739
Probable transmembrane protein.
  
  
 0.545
RSc2376
Putative ferredoxin protein.
   
 
 0.531
RSc0437
Probable signal peptide protein.
  
  
 0.518
RSc0438
Probable signal peptide protein.
  
  
 0.518
RSc0807
Putative tautomerase (4-oxalocrotonate tautomerase) protein.
   
   0.512
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.