STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSc0841Conserved hypothetical protein; Miscellaneous; hypothetical/global homology. (135 aa)    
Predicted Functional Partners:
RSc0839
Probable bacteriophage-related protein.
     0.882
RSc0836
Conserved hypothetical protein; Miscellaneous; hypothetical/global homology.
 
     0.836
RSc0834
Miscellaneous; hypothetical/partial homology.
 
     0.833
RSc0835
Conserved hypothetical protein; Miscellaneous; hypothetical/global homology.
 
     0.833
RSc3229
Putative bacteriophage-related protein.
     0.798
RSc0844
Putative dna modification methylase protein; Belongs to the N(4)/N(6)-methyltransferase family.
 
     0.793
RSc3228
Putative bacteriophage-related protein.
 
     0.786
RSc3231
Conserved hypothetical protein; Miscellaneous; hypothetical/global homology.
 
     0.786
RSc3234
Conserved hypothetical protein; Miscellaneous; hypothetical/global homology.
 
     0.783
RSc3235
Conserved hypothetical protein; Miscellaneous; hypothetical/global homology.
 
     0.783
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.