STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSc0859Probable bacteriophage-related protein. (125 aa)    
Predicted Functional Partners:
RSc0860
Probable bacteriophage-related protein.
 
     0.954
RSc0853
Probable bacteriophage-related protein.
 
  
 0.952
RSc0857
Probable bacteriophage-related protein.
 
  
 0.951
RSc0858
Probable bacteriophage-related protein.
 
    0.950
RSc1924
Probable phage-related protein (baseplate assembly-like protein).
  
 
 0.941
RSc0852
Putative bacteriophage-related protein.
 
     0.910
RSc1912
Probable phage-related protein.
  
 
 0.902
RSc1917
Probable phage-related protein (major tail tube-like protein).
  
 
 0.898
RSp0580
Probable product of a truncated bacteriophage gene protein.
 
  
 0.885
RSc1922
Probable tail-related protein (tail formation-like protein).
  
 
 0.876
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.