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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSc0863Conserved hypothetical protein; Miscellaneous; hypothetical/global homology. (257 aa)    
Predicted Functional Partners:
RSc0864
Conserved hypothetical protein; Miscellaneous; hypothetical/global homology.
       0.806
RSc0866
Conserved hypothetical protein; Miscellaneous; hypothetical/global homology.
       0.788
RSc0865
Hypothetical protein; Miscellaneous; unknown.
       0.773
RSc0859
Probable bacteriophage-related protein.
       0.572
RSc0860
Probable bacteriophage-related protein.
       0.572
RSc0861
Conserved hypothetical protein; Miscellaneous; hypothetical/global homology.
       0.572
RSc0862
Probable signal peptide protein.
       0.572
RSc0855
Hypothetical protein; Miscellaneous; unknown.
       0.562
RSc0856
Hypothetical protein; Miscellaneous; unknown.
       0.562
RSc0857
Probable bacteriophage-related protein.
       0.562
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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