STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RSc0873Putative bacteriophage-related transmembrane protein. (1366 aa)    
Predicted Functional Partners:
RSc0883
Putative lysozyme (endolysin) protein.
 
     0.870
RSc1694
Probable phage hk022 gp18-related protein.
  
 
 0.854
RSc1691
Probable phage hk97 gp17-related protein.
  
 
 0.848
RSc1695
Probable phage hk022 gp19-related protein.
  
 
 0.835
RSc1698
Probable bacteriophage protein.
  
   0.835
RSc1696
Probable phage hk022 gp20-related protein.
  
   0.821
RSc0874
Probable transmembrane protein.
       0.799
RSc0875
Putative curculin-like (mannose-binding) lectin protein.
       0.799
RSc0876
Conserved hypothetical protein; Miscellaneous; hypothetical/global homology.
       0.799
RSc0877
Conserved hypothetical protein; Miscellaneous; hypothetical/global homology.
       0.792
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.