STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tyrAPutative prephenate dehydrogenase oxidoreductase protein. (298 aa)    
Predicted Functional Partners:
pheA
Probable bifunctional protein: chorismate mutase and prephenate dehydratase.
 0.995
aroA
Probable 3-phosphoshikimate 1-carboxyvinyltransferase (epsp synthase) protein; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate.
 
  
 0.993
hisC2
Probable histidinol-phosphate aminotransferase 2 (imidazoleacetol-phosphate transaminase 2) protein; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily.
 
 
 0.992
cmk
Probable cytidylate kinase (ck) (cytidine monophosphate kinase)(cmp kinase) protein.
 
  
 0.970
hisC1
Probable histidinol-phosphate aminotransferase 1 (imidazoleacetol-phosphate transaminase 1) protein; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily.
 
 
 0.970
tyrB
Probable aromatic-amino-acid aminotransferase protein.
    
 0.969
RSp0197
Putative chorismate mutase protein; Catalyzes the Claisen rearrangement of chorismate to prephenate.
  
 0.938
RSc2512
Putative cyclohexadienyl dehydratase precursor signal peptide protein; Belongs to the bacterial solute-binding protein 3 family.
    
 0.909
aspC
Probable aspartate aminotransferase protein.
    
 0.908
aatA2
Probable aspartate aminotransferase a protein.
    
 0.908
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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