STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSc0950Hypothetical h^pothetical protein. (366 aa)    
Predicted Functional Partners:
RSc0951
Hypothetical protein of unknown function duf323.
  
 0.991
RSc1789
Hypothetical protein of unknown function duf323.
  
 0.984
RSc0485
Probable glutamine amidotransferase, class-II; protein.
  
  
 0.733
RSc0235
Hypothetical protein of unknown function duf427.
 
     0.570
RSc2516
Osmoprotectant transport system permease protein; Putative abc type transporter : periplasmic glycine betaine / choline-binding lipoprotein and permease components transmembrane.
 
     0.565
RSc2542
Putative lipoprotein transmembrane.
 
  
 0.530
RSc1077
Probable transmembrane protein.
   
    0.502
RSc2899
Hypothetical transmembrane protein.
   
    0.502
RSp0696
Putative aminotransferase, class v; protein.
  
  
 0.465
RSc1128
Conserved hypothetical protein; Miscellaneous; hypothetical/global homology.
   
    0.418
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.