STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RSc0950Hypothetical h^pothetical protein. (366 aa)    
Predicted Functional Partners:
RSc0951
Hypothetical protein of unknown function duf323.
  
 0.992
RSc1789
Hypothetical protein of unknown function duf323.
  
 0.986
hutH1
Probable histidine ammonia-lyase (histidase) protein; Belongs to the PAL/histidase family.
     
  0.900
hisD
Probable histidinol dehydrogenase (hdh). oxidoreductase protein; Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine.
     
  0.900
hutH2
Probable histidine ammonia-lyase protein.
     
  0.900
RSc0485
Probable glutamine amidotransferase, class-II; protein.
  
  
 0.748
RSc1077
Probable transmembrane protein.
   
    0.674
RSc2899
Hypothetical transmembrane protein.
   
    0.674
RSc0235
Hypothetical protein of unknown function duf427.
 
     0.656
RSc2516
Osmoprotectant transport system permease protein; Putative abc type transporter : periplasmic glycine betaine / choline-binding lipoprotein and permease components transmembrane.
 
     0.649
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.