STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSc0962Putative bacteriophage dna-binding transcription regulator protein. (88 aa)    
Predicted Functional Partners:
RSc1896
Putative integrase prophage protein; Belongs to the 'phage' integrase family.
 
  
 0.770
RSc1871
Putative integrase prophage protein; Belongs to the 'phage' integrase family.
 
  
 0.764
RSc0968
Probable cp4-like integrase protein; Belongs to the 'phage' integrase family.
 
  
 0.763
RSc2489
Putative integrase protein; Belongs to the 'phage' integrase family.
 
  
 0.761
RSc1494
Putative integrase-like protein; Belongs to the 'phage' integrase family.
 
  
 0.745
RSc0963
Hypothetical protein; Miscellaneous; unknown.
       0.723
int
Integrase-tyrosine recombinase protein; Belongs to the 'phage' integrase family.
 
  
 0.489
RSc0964
Putative bacteriophage transcriptional activator-related transcription regulator protein.
     
 0.400
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.